class: center, middle, inverse, title-slide # Lecture 9 ## Reproduction ###
WILD3810 (Spring 2021) --- ## Readings > Mills 70-71 --- ## Life tables #### Last lecture, we learned *why* and *how* to estimate age-specific patterns of survival and mortality .left-column[ <img src="https://upload.wikimedia.org/wikipedia/commons/f/f6/Phlox_drummondii_-_Archer_FL_02.jpg" width="100%" style="display: block; margin: auto;" /> ] .right-column[ <img src="figs/phlox_lt.png" width="80%" style="display: block; margin: auto;" /> ] --- ## Life tables #### Survival is not the only demographic process that varies with age -- #### Reproductive output also varies with age <img src="figs/repro_schedule.png" width="80%" style="display: block; margin: auto;" /> --- class: inverse, center, middle # Reproduction --- ## Reproduction ### Terminology #### Breeding Probability > chance an adult will breed -- #### Natality: > average number of offspring born per individual that reproduces -- - Clutch Size: birds, monotremes, oviparous herps, fish & insects - Litter Size: mammals, viviparous herps & fish - Progeny number: all others --- ## Reproduction ### Terminology #### Fecundity `\(\Large (m_x)\)` > average number of offspring born per mature adult of age `\(x\)` -- - typically measured as the number of *female* offspring produced per adult female (limiting sex) <br/> -- `$$\LARGE m_x = \frac{Breeding\;\; Probability_x \times Natality_x}{2}$$` --- ## Reproduction #### Estimation **Breeding Probability estimation** - Advanced multi-state CMR methods - Hormone analysis (blood, hair/feather, or fecal samples) - Flowering rates in mature plants -- **Natality estimation** - Direct observations in a sample of clutches, litters, or seed sets - Number of corpora lutea scars in ovaries of hunted mammals - Field ultrasounds on live captured individuals --- ## Reproduction #### Estimation using life tables - `\(\Large F_x\)`: Total offspring produced by each age class <table class="table table-striped table-hover table-condensed table-responsive" style="font-size: 12px; margin-left: auto; margin-right: auto;"> <thead> <tr> <th style="text-align:center;"> \(x\) </th> <th style="text-align:center;"> \(N_x\) </th> <th style="text-align:center;"> \(l_x\) </th> <th style="text-align:center;"> \(F_x\) </th> <th style="text-align:center;"> </th> <th style="text-align:center;"> </th> </tr> </thead> <tbody> <tr> <td style="text-align:center;"> 0 </td> <td style="text-align:center;"> 996 </td> <td style="text-align:center;"> 1.000 </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 7 </td> <td style="text-align:center;"> 159 </td> <td style="text-align:center;"> 0.160 </td> <td style="text-align:center;"> 53 </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 8 </td> <td style="text-align:center;"> 154 </td> <td style="text-align:center;"> 0.155 </td> <td style="text-align:center;"> 485 </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 9 </td> <td style="text-align:center;"> 147 </td> <td style="text-align:center;"> 0.148 </td> <td style="text-align:center;"> 802 </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 10 </td> <td style="text-align:center;"> 105 </td> <td style="text-align:center;"> 0.105 </td> <td style="text-align:center;"> 972 </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 11 </td> <td style="text-align:center;"> 22 </td> <td style="text-align:center;"> 0.022 </td> <td style="text-align:center;"> 95 </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 12 </td> <td style="text-align:center;"> 0 </td> <td style="text-align:center;"> 0.000 </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> </td> <td style="text-align:center;"> </td> </tr> </tbody> </table> --- ## Reproduction - `\(\Large m_x\)`: Number of offspring produced per living individual in age class `\(\Large x\)` (fecundity) <table class="table table-striped table-hover table-condensed table-responsive" style="font-size: 12px; margin-left: auto; margin-right: auto;"> <thead> <tr> <th style="text-align:center;"> \(x\) </th> <th style="text-align:center;"> \(N_x\) </th> <th style="text-align:center;"> \(l_x\) </th> <th style="text-align:center;"> \(F_x\) </th> <th style="text-align:center;"> \(m_x\) </th> <th style="text-align:center;"> </th> </tr> </thead> <tbody> <tr> <td style="text-align:center;"> 0 </td> <td style="text-align:center;"> 996 </td> <td style="text-align:center;"> 1.000 </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 7 </td> <td style="text-align:center;"> 159 </td> <td style="text-align:center;"> 0.160 </td> <td style="text-align:center;"> 53 </td> <td style="text-align:center;"> 0.33 </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 8 </td> <td style="text-align:center;"> 154 </td> <td style="text-align:center;"> 0.155 </td> <td style="text-align:center;"> 485 </td> <td style="text-align:center;"> 3.13 </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 9 </td> <td style="text-align:center;"> 147 </td> <td style="text-align:center;"> 0.148 </td> <td style="text-align:center;"> 802 </td> <td style="text-align:center;"> 5.42 </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 10 </td> <td style="text-align:center;"> 105 </td> <td style="text-align:center;"> 0.105 </td> <td style="text-align:center;"> 972 </td> <td style="text-align:center;"> 9.26 </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 11 </td> <td style="text-align:center;"> 22 </td> <td style="text-align:center;"> 0.022 </td> <td style="text-align:center;"> 95 </td> <td style="text-align:center;"> 4.31 </td> <td style="text-align:center;"> </td> </tr> <tr> <td style="text-align:center;"> 12 </td> <td style="text-align:center;"> 0 </td> <td style="text-align:center;"> 0.000 </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> </td> </tr> </tbody> </table> --- ## Reproduction - `\(\Large l_xm_x\)`: Number of offspring produced per **original** individual <table class="table table-striped table-hover table-condensed table-responsive" style="font-size: 12px; margin-left: auto; margin-right: auto;"> <thead> <tr> <th style="text-align:center;"> \(x\) </th> <th style="text-align:center;"> \(N_x\) </th> <th style="text-align:center;"> \(l_x\) </th> <th style="text-align:center;"> \(F_x\) </th> <th style="text-align:center;"> \(m_x\) </th> <th style="text-align:center;"> \(l_xm_x\) </th> </tr> </thead> <tbody> <tr> <td style="text-align:center;"> 0 </td> <td style="text-align:center;"> 996 </td> <td style="text-align:center;"> 1.000 </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> - </td> </tr> <tr> <td style="text-align:center;"> 7 </td> <td style="text-align:center;"> 159 </td> <td style="text-align:center;"> 0.160 </td> <td style="text-align:center;"> 53 </td> <td style="text-align:center;"> 0.33 </td> <td style="text-align:center;"> 0.0528 </td> </tr> <tr> <td style="text-align:center;"> 8 </td> <td style="text-align:center;"> 154 </td> <td style="text-align:center;"> 0.155 </td> <td style="text-align:center;"> 485 </td> <td style="text-align:center;"> 3.13 </td> <td style="text-align:center;"> 0.48515 </td> </tr> <tr> <td style="text-align:center;"> 9 </td> <td style="text-align:center;"> 147 </td> <td style="text-align:center;"> 0.148 </td> <td style="text-align:center;"> 802 </td> <td style="text-align:center;"> 5.42 </td> <td style="text-align:center;"> 0.80216 </td> </tr> <tr> <td style="text-align:center;"> 10 </td> <td style="text-align:center;"> 105 </td> <td style="text-align:center;"> 0.105 </td> <td style="text-align:center;"> 972 </td> <td style="text-align:center;"> 9.26 </td> <td style="text-align:center;"> 0.9723 </td> </tr> <tr> <td style="text-align:center;"> 11 </td> <td style="text-align:center;"> 22 </td> <td style="text-align:center;"> 0.022 </td> <td style="text-align:center;"> 95 </td> <td style="text-align:center;"> 4.31 </td> <td style="text-align:center;"> 0.09482 </td> </tr> <tr> <td style="text-align:center;"> 12 </td> <td style="text-align:center;"> 0 </td> <td style="text-align:center;"> 0.000 </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> - </td> <td style="text-align:center;"> - </td> </tr> </tbody> </table> -- `\(\large R_0\)`: Basic reproductive rate `\(\large = \sum l_xm_x = \frac{\sum F_x}{N_0} = 2.41\)` --- ## Reproduction #### `\(\large R_0\)`: Basic reproductive rate - includes the influence of both survival `\((\large l_x)\)` and reproduction of survivors `\((\large m_x)\)` + 15.5% of individuals survive to age 8 + those survivors produce, on average, 3.13 offspring + the average number of offspring produced by 8yo individuals **per original individual** = 0.48 -- - defines the overall extent to which population changes + `\(\large R_0 = 1\)` means the population exactly replaces itself per *generation* -- - `\(\Large r \approx \frac{ln(R_0)}{T}\)` + `\(\large T\)` = **average cohort lifespan** (average time from the birth of an individual to the birth of its offspring) + annual species: `\(T = 1\)`, `\(r = ln(R_0)\)` --- class: center, middle, inverse # Fecundity schedules --- ## Fecundity schedules .left-column[ <img src="https://upload.wikimedia.org/wikipedia/commons/a/a4/Black-legged_Kittiwake_%2817742276573%29.jpg" width="100%" style="display: block; margin: auto;" /> ] .right-column[ <img src="figs/kitiwake.png" width="80%" style="display: block; margin: auto;" /> ] --- ## Fecundity schedules .left-column[ <img src="https://upload.wikimedia.org/wikipedia/commons/5/50/MK00658_Badlands_Bighorn_Sheep.jpg" width="100%" style="display: block; margin: auto;" /> ] .right-column[ #### Breeding probability vs. age <img src="figs/sheep.png" width="80%" style="display: block; margin: auto;" /> ] ??? Image courtesy of Martin Kraft, via WikiCommons --- ## Fecundity schedules #### Change in Canadian fecundity schedules over time .left-column[ <img src="https://upload.wikimedia.org/wikipedia/commons/c/cf/Flag_of_Canada.svg" width="100%" style="display: block; margin: auto;" /> ] .right-column[ #### Births/1000 women <img src="figs/canada_schedule.png" width="80%" style="display: block; margin: auto;" /> ]